psmb8.L proteasome 20S subunit beta 8 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: psmb8.L
Official Full Name: proteasome 20S subunit beta 8 L homeolog
Primary source: Xenbase:XB-GENE-479068
Locus tag: XELAEV_18039145mg
See related: EnsemblRapid:ENSXLAG00005024054
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: lmp7; psmb8
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Genomic context

Location:: chromosome: 8L

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	8L	NC_054385.1 (64980883..64989992)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	8L	NC_030738.1 (51486194..51495306)

Chromosome 8L - NC_054385.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables threonine-type endopeptidase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within cell differentiation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within immune system process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within proteolysis involved in protein catabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of proteasome complex	IEA Inferred from Electronic Annotation more info
part_of proteasome core complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: proteasome 20S subunit beta 8 L homeolog

Names: low molecular mass protein-7 (LMP-7) homolog; proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7); proteasome subunit LMP7; proteasome subunit beta 8 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001090854.1 → NP_001084323.1 proteasome 20S subunit beta 8 L homeolog

See identical proteins and their annotated locations for NP_001084323.1

Status: PROVISIONAL

Source sequence(s)

D44540

UniProtKB/TrEMBL

A0A974C787, Q91787

Related

ENSXLAP00005071214.1, ENSXLAT00005072760.1

Conserved Domains (2) summary

PTZ00488
Location:31 → 269

PTZ00488; Proteasome subunit beta type-5; Provisional

cd03761
Location:67 → 254

proteasome_beta_type_5; proteasome beta type-5 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...