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frc fringe connection [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39943, updated on 18-Sep-2024

Summary

Official Symbol
frcprovided by FlyBase
Official Full Name
fringe connectionprovided by FlyBase
Primary source
FLYBASE:FBgn0042641
Locus tag
Dmel_CG3874
See related
AllianceGenome:FB:FBgn0042641
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0172774.5; anon-WO0172774.7; CG3874; dFRC; Dmel\CG3874; Frc; FRC; l(3)00073; l(3)02619; l(3)10098; l(3)j2E3; l(3)L6750; l(3)S070006; UDP-GlcNAc/UDP-GlcUA; ust74C; UST74C
Summary
Enables antiporter activity and pyrimidine nucleotide-sugar transmembrane transporter activity. Involved in several processes, including imaginal disc development; pyrimidine nucleotide-sugar transmembrane transport; and segment polarity determination. Located in Golgi medial cisterna. Is expressed in adult fat body; adult head; and organism. Human ortholog(s) of this gene implicated in schneckenbecken dysplasia. Orthologous to several human genes including SLC35D1 (solute carrier family 35 member D1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See frc in Genome Data Viewer
Location:
74B5-74C1; 3-45 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17428936..17433190, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17422036..17426290, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene RNA polymerase III subunit G Neighboring gene Golgin, RAB6 interacting Neighboring gene Coenzyme Q4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
NOT enables GDP-fucose transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
NOT enables GDP-mannose transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables UDP-N-acetylgalactosamine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables UDP-N-acetylglucosamine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables UDP-N-acetylglucosamine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
NOT enables UDP-galactose transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables UDP-galactose transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
NOT enables UDP-glucose transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables UDP-glucose transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables UDP-glucuronic acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables UDP-glucuronic acid transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables UDP-xylose transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables antiporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables antiporter activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in Golgi medial cisterna IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
fringe connection
Names
CG3874-PA
CG3874-PB
Fringe-connection
UDP-sugar transporter in 74C
frc-PA
frc-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    17428936..17433190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001144490.3NP_001137962.1  fringe connection, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137962.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q95YI5, Q9VVG8
    UniProtKB/TrEMBL
    B7Z066
    Conserved Domains (1) summary
    pfam03151
    Location:67348
    TPT; Triose-phosphate Transporter family
  2. NM_079402.4NP_524126.1  fringe connection, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524126.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q95YI5, Q9VVG8
    UniProtKB/TrEMBL
    B7Z066
    Related
    FBpp0074990
    Conserved Domains (1) summary
    pfam03151
    Location:67348
    TPT; Triose-phosphate Transporter family