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pck2.L phosphoenolpyruvate carboxykinase 2 (mitochondrial) L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 399424, updated on 3-Jul-2024

Summary

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Official Symbol
pck2.L
Official Full Name
phosphoenolpyruvate carboxykinase 2 (mitochondrial) L homeolog
Primary source
Xenbase:XB-GENE-974269
Locus tag
XELAEV_18007023mg
See related
EnsemblRapid:ENSXLAG00005034472
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
pck2; pck2.S
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Genomic context

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See pck2.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (150633767..150643826, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (137758908..137769031, complement)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene fat storage-inducing transmembrane protein 1 L homeolog Neighboring gene DDB1 and CUL4 associated factor 11 L homeolog Neighboring gene CCAAT enhancer binding protein epsilon L homeolog Neighboring gene solute carrier family 7 member 8 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables carboxy-lyase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables phosphoenolpyruvate carboxykinase (GTP) activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within gluconeogenesis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phosphoenolpyruvate carboxykinase 2 (mitochondrial) L homeolog
Names
phosphoenolpyruvate carboxykinase 2 (mitochondrial) S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001090833.1 → NP_001084302.1  phosphoenolpyruvate carboxykinase 2 (mitochondrial) L homeolog

    See identical proteins and their annotated locations for NP_001084302.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072287
    UniProtKB/TrEMBL
    Q6INJ3, Q7ZXZ8
    Related
    ENSXLAP00005103139.1, ENSXLAT00005105143.1
    Conserved Domains (1) summary
    cd00819
    Location:47 → 636
    PEPCK_GTP; Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis. It catalyzes the reversible decarboxylation and ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    150633767..150643826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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