csnk1e.L casein kinase 1 epsilon L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: csnk1e.L
Official Full Name: casein kinase 1 epsilon L homeolog
Primary source: Xenbase:XB-GENE-865132
Locus tag: XELAEV_18023699mg
See related: EnsemblRapid:ENSXLAG00005025996
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ckie; csnk1e; CKIepsilon; ck1epsilon; ck1-epsilon; tptep2-csnk1e.L; LOC400927-csnk1e; LOC400927-csnk1e.L
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Genomic context

Location:: chromosome: 4L

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4L	NC_054377.1 (120508187..120548558, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4L	NC_030730.1 (115187847..115228343, complement)

Chromosome 4L - NC_054377.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Casein kinase 1epsilon activates minus-end-directed transport of membrane organelles along microtubules. CK1epsilon functions downstream of protein phosphatase PP2A in the pigment aggregation signaling pathway.
Title: CK1 activates minus-end-directed transport of membrane organelles along microtubules.
casein kinase I epsilon activity is regulated by Wnt signaling
Title: Regulation of casein kinase I epsilon activity by Wnt signaling.

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables protein kinase activity	IEA Inferred from Electronic Annotation more info
enables protein serine/threonine kinase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within endocytosis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within peptidyl-serine phosphorylation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within phosphorylation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of canonical Wnt signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of proteasomal ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein phosphorylation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: TPTEP2-CSNK1E readthrough L homeolog; casein kinase 1 epsilon L homeolog

Names: casein kinase I epsilon

NP_001084228.1

EC 2.7.11.1

XP_018112072.1

EC 2.7.11.1

XP_018112073.1

EC 2.7.11.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001090759.1 → NP_001084228.1 casein kinase 1 epsilon L homeolog

See identical proteins and their annotated locations for NP_001084228.1

Status: PROVISIONAL

Source sequence(s)

BC097547

UniProtKB/TrEMBL

A0A974D7I3, Q9PUI2

Related

ENSXLAP00005077489.1, ENSXLAT00005079080.1

Conserved Domains (2) summary

COG0515
Location:8 → 285

SPS1; Serine/threonine protein kinase [Signal transduction mechanisms]

cd14125
Location:8 → 282

STKc_CK1_delta_epsilon; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 delta and epsilon

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

120508187..120548558 complement

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GenBank, FASTA, Sequence Viewer (Graphics)