psmd12.S proteasome 26S subunit, non-ATPase 12 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: psmd12.S
Official Full Name: proteasome 26S subunit, non-ATPase 12 S homeolog
Primary source: Xenbase:XB-GENE-970358
Locus tag: XELAEV_18046862mg
See related: EnsemblRapid:ENSXLAG00005015925 AllianceGenome:Xenbase:XB-GENE-970358
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rpn5; psmd12
Summary: Predicted to be located in cytoplasm. Predicted to be part of proteasome regulatory particle, lid subcomplex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 9_10S

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10S	NC_054388.1 (46487453..46497581, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10S	NC_030741.1 (39807936..39818064, complement)

Chromosome 9_10S - NC_054388.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
part_of proteasome complex	IEA Inferred from Electronic Annotation more info
part_of proteasome regulatory particle, lid subcomplex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: proteasome 26S subunit, non-ATPase 12 S homeolog

Names: proteasome (prosome, macropain) 26S subunit, non-ATPase, 12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001090530.1 → NP_001083999.1 proteasome 26S subunit, non-ATPase 12 S homeolog

See identical proteins and their annotated locations for NP_001083999.1

Status: PROVISIONAL

Source sequence(s)

BC079690

UniProtKB/TrEMBL

A0A974BUL4, Q6AXA3

Related

ENSXLAP00005046896.1, ENSXLAT00005048000.1

Conserved Domains (1) summary

COG5071
Location:2 → 441

RPN5; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

46487453..46497581 complement

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GenBank, FASTA, Sequence Viewer (Graphics)