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ap1g1.L adaptor related protein complex 1 subunit gamma 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 399243, updated on 4-Nov-2024

Summary

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Official Symbol
ap1g1.L
Official Full Name
adaptor related protein complex 1 subunit gamma 1 L homeolog
Primary source
Xenbase:XB-GENE-983622
Locus tag
XELAEV_18004715mg
See related
EnsemblRapid:ENSXLAG00005034327 AllianceGenome:Xenbase:XB-GENE-983622
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ap1g1; wu:fc30a11
Summary
Predicted to enable clathrin adaptor activity. Predicted to act upstream of or within Golgi to vacuole transport and intracellular protein transport. Predicted to be located in Golgi apparatus; cytoplasmic vesicle; and membrane. Predicted to be part of AP-1 adaptor complex. Orthologous to human AP1G1 (adaptor related protein complex 1 subunit gamma 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ap1g1.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
25
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (52579871..52612183)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694888.1 (189868..222312, complement)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene urate (5-hydroxyiso-) hydrolase L homeolog Neighboring gene blastomere cadherin-like S homeolog Neighboring gene provisional ortholog of IST1 factor associated with ESCRT-III L homeolog Neighboring gene PH domain and leucine rich repeat protein phosphatase 2 L homeolog Neighboring gene MARVEL domain containing 3 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within Golgi to vacuole transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within intracellular protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of AP-1 adaptor complex IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
adaptor related protein complex 1 gamma 1 subunit
Names
adaptor related protein complex 1 gamma 1 subunit L homeolog
adaptor-related protein complex 1, gamma 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001090528.1 → NP_001083997.1  adaptor related protein complex 1 gamma 1 subunit

    See identical proteins and their annotated locations for NP_001083997.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073198
    UniProtKB/TrEMBL
    Q6GPE1, Q7ZXB3
    Related
    ENSXLAP00005102782.1, ENSXLAT00005104778.1
    Conserved Domains (3) summary
    smart00809
    Location:699 → 807
    Alpha_adaptinC2; Adaptin C-terminal domain
    pfam01602
    Location:23 → 574
    Adaptin_N; Adaptin N terminal region
    sd00044
    Location:142 → 163
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    52579871..52612183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018242201.2 → XP_018097690.1  adaptor related protein complex 1 gamma 1 subunit isoform X1

    UniProtKB/TrEMBL
    A0A8J0U612, Q7ZXB3
    Related
    ENSXLAP00005102728.1, ENSXLAT00005104723.1

  2. XM_018242204.2 → XP_018097693.1  adaptor related protein complex 1 gamma 1 subunit isoform X2

    UniProtKB/TrEMBL
    A0A310TMV4, A0A974BR13, A0AA97PYW8, Q7ZXB3
    Related
    ENSXLAP00005102962.1, ENSXLAT00005104966.1
Nucleotide Protein Strain
Heading Accession and Version

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