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rplp1.L ribosomal protein, large, P1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 399029, updated on 4-Nov-2024

Summary

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Official Symbol
rplp1.L
Official Full Name
ribosomal protein, large, P1 L homeolog
Primary source
Xenbase:XB-GENE-5770143
Locus tag
XELAEV_18032410mg
See related
EnsemblRapid:ENSXLAG00005027972 AllianceGenome:Xenbase:XB-GENE-5770143
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rplp1
Summary
Predicted to enable protein kinase activator activity and ribonucleoprotein complex binding activity. Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within cytoplasmic translation and translational elongation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPLP1 (ribosomal protein lateral stalk subunit P1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See rplp1.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (158208037..158212329, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (149075585..149079877, complement)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine kinase 2 L homeolog Neighboring gene argonaute 2, RISC catalytic component L homeolog Neighboring gene nucleolar protein dao-5 Neighboring gene ABC transporter F family member 4-like Neighboring gene DENN/MADD domain containing 3 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The termination of UHRF1-dependent PAF15 ubiquitin signaling is regulated by USP7 and ATAD5. Miyashita R, et al. Elife, 2023 Feb 3. PMID 36734974, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC68562

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables protein kinase activator activity IEA
Inferred from Electronic Annotation
more info
  
enables ribonucleoprotein complex binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within translational elongation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal protein, large, P1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001090161.1 → NP_001083630.1  ribosomal protein, large, P1 L homeolog

    See identical proteins and their annotated locations for NP_001083630.1

    Status: PROVISIONAL

    Source sequence(s)
    BC062379
    UniProtKB/TrEMBL
    A0A974CPY0, Q6P699
    Related
    ENSXLAP00005083118.1, ENSXLAT00005084756.1
    Conserved Domains (1) summary
    cd05831
    Location:6 → 63
    Ribosomal_P1; Ribosomal protein P1. This subfamily represents the eukaryotic large ribosomal protein P1. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P1 is located in the L12 stalk, with proteins ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    158208037..158212329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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