rdh16.2.L retinol dehydrogenase 16 gene 2 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rdh16.2.L
Official Full Name: retinol dehydrogenase 16 gene 2 L homeolog
Primary source: Xenbase:XB-GENE-5807252
Locus tag: XELAEV_18013406mg
See related: EnsemblRapid:ENSXLAG00005006667
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: XB5807236; XB5807236.L; LOC100170425.L
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Genomic context

Location:: chromosome: 2L

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (145929232..145937618, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (139992347..140000734, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables all-trans-retinol dehydrogenase (NAD+) activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within retinol metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within steroid metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC399015

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001090133.1 → NP_001083602.1 uncharacterized protein LOC399015

See identical proteins and their annotated locations for NP_001083602.1

Status: PREDICTED

Source sequence(s)

BC061680

UniProtKB/TrEMBL

A0A974HZB1, Q6P7G3

Related

ENSXLAP00005019738.1, ENSXLAT00005020099.1

Conserved Domains (2) summary

pfam00106
Location:31 → 212

adh_short; short chain dehydrogenase

cl21454
Location:31 → 306

NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

145929232..145937618 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)