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tspan36.L tetraspanin 36 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398992, updated on 4-Nov-2024

Summary

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Official Symbol
tspan36.L
Official Full Name
tetraspanin 36 L homeolog
Primary source
Xenbase:XB-GENE-5731038
Locus tag
XELAEV_18008440mg
See related
EnsemblRapid:ENSXLAG00005029154 AllianceGenome:Xenbase:XB-GENE-5731038
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tspan36
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See tspan36.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (222487688..222511140)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (209290010..209313764)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene tubulin monoglycylase TTLL3-like Neighboring gene mex-3 RNA binding family member C L homeolog Neighboring gene acyl-coenzyme A amino acid N-acyltransferase 1-like Neighboring gene acyl-coenzyme A amino acid N-acyltransferase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68546

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Tetraspanin-36-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001090093.1 → NP_001083562.1  Tetraspanin-36-like

    See identical proteins and their annotated locations for NP_001083562.1

    Status: PROVISIONAL

    Source sequence(s)
    BC061648
    UniProtKB/TrEMBL
    A0A974E2Z1, Q6P7J5
    Related
    ENSXLAP00005087028.1, ENSXLAT00005088690.1
    Conserved Domains (3) summary
    cl02781
    Location:103 → 205
    tetraspanin_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL). Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the ...
    pfam00335
    Location:9 → 231
    Tetraspannin; Tetraspanin family
    pfam09788
    Location:13 → 72
    Tmemb_55A; Transmembrane protein 55A

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    222487688..222511140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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