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elmo2.S engulfment and cell motility 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398953, updated on 18-Sep-2024

Summary

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Official Symbol
elmo2.S
Official Full Name
engulfment and cell motility 2 S homeolog
Primary source
Xenbase:XB-GENE-986990
Locus tag
XELAEV_18046556mg
See related
EnsemblRapid:ENSXLAG00005028728
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ced12; ced-12; elmo-2
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Genomic context

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See elmo2.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
25
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (32636424..32669465)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (27148577..27181704)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene cyclin D-type binding-protein 1 S homeolog Neighboring gene small nuclear ribonucleoprotein polypeptides B and B1 S homeolog Neighboring gene solute carrier family 35 (GDP-fucose transporter), member C2 S homeolog Neighboring gene waprin-Rha1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Rac1 regulator ELMO controls basal body migration and docking in multiciliated cells through interaction with Ezrin. Epting D, et al. Development, 2015 Jan 1. PMID 25516973
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68475

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within actin filament organization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell motility IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phagocytosis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
engulfment and cell motility 2 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001090018.1 → NP_001083487.1  engulfment and cell motility 2 S homeolog

    See identical proteins and their annotated locations for NP_001083487.1

    Status: PROVISIONAL

    Source sequence(s)
    BC060396
    UniProtKB/TrEMBL
    A0A974BTK4, Q6PAA3
    Related
    ENSXLAP00005085807.1, ENSXLAT00005087469.1
    Conserved Domains (3) summary
    cd13359
    Location:551 → 680
    PH_ELMO1_CED-12; Engulfment and cell motility protein 1 pleckstrin homology (PH) domain
    pfam04727
    Location:309 → 481
    ELMO_CED12; ELMO/CED-12 family
    pfam11841
    Location:115 → 283
    DUF3361; Domain of unknown function (DUF3361)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    32636424..32669465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018237380.2 → XP_018092869.1  engulfment and cell motility 2 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0U0H8
    Related
    ENSXLAP00005085704.1, ENSXLAT00005087366.1

  2. XM_018237378.2 → XP_018092867.1  engulfment and cell motility 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974BTK4, Q6PAA3

  3. XM_018237377.2 → XP_018092866.1  engulfment and cell motility 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974BTK4, Q6PAA3

  4. XM_018237379.2 → XP_018092868.1  engulfment and cell motility 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974BTK4, Q6PAA3
Nucleotide Protein Strain
Heading Accession and Version

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