U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

allc.L allantoicase L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398942, updated on 17-Aug-2024

Summary

Official Symbol
allc.L
Official Full Name
allantoicase L homeolog
Primary source
Xenbase:XB-GENE-1002648
Locus tag
XELAEV_18028016mg
See related
EnsemblRapid:ENSXLAG00005031921
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
allc
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See allc.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (146004532..146024066)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (134927652..134947240)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA73 family Neighboring gene collectin subfamily member 11 L homeolog Neighboring gene ribosomal protein S7 L homeolog Neighboring gene uncharacterized LOC121393946 Neighboring gene SRY-box 11 L homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
allantoicase
Names
allantoate amidinohydrolase
NP_001083467.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001089998.1NP_001083467.1  allantoicase

    See identical proteins and their annotated locations for NP_001083467.1

    Status: PROVISIONAL

    Source sequence(s)
    BC060404
    UniProtKB/Swiss-Prot
    Q6PA96, Q9W6S5
    UniProtKB/TrEMBL
    A0A974CYM7
    Related
    ENSXLAP00005095625.1, ENSXLAT00005097375.1
    Conserved Domains (2) summary
    TIGR02961
    Location:18384
    allantoicase; allantoicase
    pfam03561
    Location:28199
    Allantoicase; Allantoicase repeat

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    146004532..146024066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)