atp6v1f.L ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: atp6v1f.L
Official Full Name: ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F L homeolog
Primary source: Xenbase:XB-GENE-6254216
Locus tag: XELAEV_18017913mg
See related: AllianceGenome:Xenbase:XB-GENE-6254216
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: vatf; vma7; atp6s14; atp6v1f; atp6v1f-a; atp6v1f-b
Summary: Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to act upstream of or within proton transmembrane transport. Predicted to be located in membrane. Predicted to be part of proton-transporting V-type ATPase, V1 domain. Is expressed in nervous system. Orthologous to human ATP6V1F (ATPase H+ transporting V1 subunit F). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 3L

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3L	NC_054375.1 (93114187..93116125)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3L	NC_030728.1 (77790465..77792403)

Chromosome 3L - NC_054375.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables proton-transporting ATPase activity, rotational mechanism	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within proton transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
part_of proton-transporting V-type ATPase, V1 domain	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: V-type proton ATPase subunit F

Names: ATPase, vacuolar, 14 kD; V-ATPase 14 kDa subunit; V-ATPase subunit F; vacuolar proton pump subunit F

NP_001083299.1

EC 7.1.2.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001089830.1 → NP_001083299.1 V-type proton ATPase subunit F

See identical proteins and their annotated locations for NP_001083299.1

Status: PROVISIONAL

Source sequence(s)

BC092123

UniProtKB/Swiss-Prot

Q9I8H3

UniProtKB/TrEMBL

A0A974DET7, Q6PAF1

Conserved Domains (1) summary

TIGR01101
Location:6 → 117

V_ATP_synt_F; vacuolar ATP synthase F subunit