sdsl.S serine dehydratase like S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: sdsl.S
Official Full Name: serine dehydratase like S homeolog
Primary source: Xenbase:XB-GENE-922213
Locus tag: XELAEV_18010383mg
See related: EnsemblRapid:ENSXLAG00005014778 AllianceGenome:Xenbase:XB-GENE-922213
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: sdsl
Summary: Predicted to enable L-serine ammonia-lyase activity and threonine deaminase activity. Predicted to act upstream of or within L-serine catabolic process; isoleucine biosynthetic process; and threonine catabolic process. Orthologous to human SDSL (serine dehydratase like). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 1S

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1S	NC_054372.1 (97963983..97977498, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1S	NC_030725.1 (119639758..119652325, complement)

Chromosome 1S - NC_054372.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables L-serine ammonia-lyase activity	IEA Inferred from Electronic Annotation more info
enables threonine deaminase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within L-serine catabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within isoleucine biosynthetic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within threonine catabolic process	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: serine dehydratase like S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001089679.1 → NP_001083148.1 serine dehydratase like S homeolog

See identical proteins and their annotated locations for NP_001083148.1

Status: PROVISIONAL

Source sequence(s)

BC060346

UniProtKB/TrEMBL

A0A974DUD8, Q6PAE9

Related

ENSXLAP00005043267.1, ENSXLAT00005044335.1

Conserved Domains (1) summary

cd06448
Location:12 → 322

L-Ser-dehyd; Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

97963983..97977498 complement

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GenBank, FASTA, Sequence Viewer (Graphics)