stxbp6.L syntaxin binding protein 6 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: stxbp6.L
Official Full Name: syntaxin binding protein 6 L homeolog
Primary source: Xenbase:XB-GENE-865830
Locus tag: XELAEV_18040001mg
See related: EnsemblRapid:ENSXLAG00005015781
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: stxbp6
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Genomic context

Location:: chromosome: 8L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	8L	NC_054385.1 (104339716..104402058, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	8L	NC_030738.1 (89656852..89719290, complement)

Chromosome 8L - NC_054385.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables phosphatidylinositol-4,5-bisphosphate binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within Golgi to plasma membrane transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within exocytosis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of SNARE complex assembly	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of exocyst	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: syntaxin binding protein 6 L homeolog

Names: syntaxin binding protein 6 (amisyn) L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001089675.1 → NP_001083144.1 syntaxin binding protein 6 L homeolog

See identical proteins and their annotated locations for NP_001083144.1

Status: PROVISIONAL

Source sequence(s)

BC060365

UniProtKB/TrEMBL

A0A974C8V6, Q6PAD0

Related

ENSXLAP00005046414.1, ENSXLAT00005047517.1

Conserved Domains (2) summary

cd14681
Location:2 → 131

PH-STXBP6; PH-like domain of Syntaxin binding protein 6

cd15892
Location:149 → 210

R-SNARE_STXBP6; SNARE domain of STXBP6

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

104339716..104402058 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041571946.1 → XP_041427880.1 syntaxin binding protein 6 L homeolog isoform X1

UniProtKB/TrEMBL

A0A974C8V6, Q6PAD0

Related

ENSXLAP00005046387.1, ENSXLAT00005047491.1

Conserved Domains (2) summary

cd14681
Location:2 → 131

PH-STXBP6; PH-like domain of Syntaxin binding protein 6

cd15892
Location:149 → 210

R-SNARE_STXBP6; SNARE domain of STXBP6