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atad3a.L ATPase family, AAA domain containing 3A L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398759, updated on 17-Aug-2024

Summary

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Official Symbol
atad3a.L
Official Full Name
ATPase family, AAA domain containing 3A L homeolog
Primary source
Xenbase:XB-GENE-946134
Locus tag
XELAEV_18035637mg
See related
EnsemblRapid:ENSXLAG00005015142
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
atad3; atad3a; atad3-b; atad3a-a; atad3a-b
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Genomic context

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Location:
chromosome: 7L
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (96139237..96190623, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (86382808..86434178, complement)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene SSU72 homolog, RNA polymerase II CTD phosphatase L homeolog Neighboring gene transmembrane protein 240 L homeolog Neighboring gene uncharacterized LOC108696555 Neighboring gene von Willebrand factor A domain containing 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68616

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ATPase family AAA domain-containing protein 3-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001089657.1 → NP_001083126.1  ATPase family AAA domain-containing protein 3-B

    See identical proteins and their annotated locations for NP_001083126.1

    Status: PROVISIONAL

    Source sequence(s)
    BC060012
    UniProtKB/Swiss-Prot
    Q6PAX2
    UniProtKB/TrEMBL
    A0A974CDI3, A0A974CG38
    Related
    ENSXLAP00005044499.1, ENSXLAT00005045580.1
    Conserved Domains (5) summary
    smart00382
    Location:342 → 472
    AAA; ATPases associated with a variety of cellular activities
    pfam00004
    Location:344 → 471
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam12037
    Location:36 → 282
    DUF3523; Domain of unknown function (DUF3523)
    cd16269
    Location:162 → 171
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:76 → 186
    GBP_C; Guanylate-binding protein, C-terminal domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    96139237..96190623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6PAX2.1 GenPept UniProtKB/Swiss-Prot:Q6PAX2

Gene LinkOut

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