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pnliprp2.L pancreatic lipase-related protein 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398754, updated on 4-Nov-2024

Summary

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Official Symbol
pnliprp2.L
Official Full Name
pancreatic lipase-related protein 2 L homeolog
Primary source
Xenbase:XB-GENE-6255439
Locus tag
XELAEV_18034280mg
See related
EnsemblRapid:ENSXLAG00005034918 AllianceGenome:Xenbase:XB-GENE-6255439
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
pnliprp2
Summary
Predicted to enable metal ion binding activity and triacylglycerol lipase activity. Predicted to act upstream of or within lipid catabolic process. Predicted to be located in extracellular space. Orthologous to human PNLIPRP2 (pancreatic lipase related protein 2 (gene/pseudogene)). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See pnliprp2.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (4131169..4143533, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (4146417..4158808, complement)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene enolase 4 L homeolog Neighboring gene heat shock protein family A (Hsp70) member 12A L homeolog Neighboring gene pancreatic lipase-related protein 2 Neighboring gene synaptic vesicular amine transporter

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68755

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables lipase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within lipid catabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
pancreatic lipase-related protein 2
NP_001083116.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001089647.1 → NP_001083116.1  pancreatic lipase-related protein 2 precursor

    See identical proteins and their annotated locations for NP_001083116.1

    Status: PROVISIONAL

    Source sequence(s)
    BC060360
    UniProtKB/TrEMBL
    A0A974CDP4, Q6PAD5
    Related
    ENSXLAP00005104400.1, ENSXLAT00005106423.1
    Conserved Domains (3) summary
    cd00707
    Location:61 → 350
    Pancreat_lipase_like; Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the ...
    cd01759
    Location:359 → 471
    PLAT_PL; PLAT/LH2 domain of pancreatic triglyceride lipase. Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of ...
    pfam00151
    Location:27 → 350
    Lipase; Lipase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    4131169..4143533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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