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rtf2.S replication termination factor 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398667, updated on 17-Aug-2024

Summary

Official Symbol
rtf2.S
Official Full Name
replication termination factor 2 S homeolog
Primary source
Xenbase:XB-GENE-6255767
Locus tag
XELAEV_18046209mg
See related
EnsemblRapid:ENSXLAG00005029070
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cdao5; rtfdc1; hspc164; c20orf43; rtfdc1.L; rtfdc1.S; shujun-3
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Genomic context

See rtf2.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (12247152..12259593)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (12139784..12152241)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene cleavage stimulation factor, 3' pre-RNA, subunit 1 S homeolog Neighboring gene Cas scaffold protein family member 4 S homeolog Neighboring gene transcription factor AP-2 gamma Neighboring gene bone morphogenetic protein 7, gene 1 S homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
replication termination factor 2 S homeolog
Names
replication termination factor 2 domain containing 1 L homeolog
replication termination factor 2 domain containing 1 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001089234.2NP_001082703.1  replication termination factor 2 S homeolog

    See identical proteins and their annotated locations for NP_001082703.1

    Status: PROVISIONAL

    Source sequence(s)
    BC054212
    UniProtKB/TrEMBL
    A0A974BSW9, Q7SYZ1
    Conserved Domains (1) summary
    pfam04641
    Location:1287
    Rtf2; Rtf2 RING-finger

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    12247152..12259593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018237362.2XP_018092851.1  replication termination factor 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8ELJ9, A0A974BSW9, A0A974BSY1
    Related
    ENSXLAP00005086662.1, ENSXLAT00005088324.1