U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

dhdds.L dehydrodolichyl diphosphate synthase subunit L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398626, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
dhdds.L
Official Full Name
dehydrodolichyl diphosphate synthase subunit L homeolog
Primary source
Xenbase:XB-GENE-1002146
Locus tag
XELAEV_18012111mg
See related
EnsemblRapid:ENSXLAG00005030086 AllianceGenome:Xenbase:XB-GENE-1002146
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
dhdds
Summary
Predicted to enable dehydrodolichyl diphosphate synthase activity and polyprenyltransferase activity. Predicted to act upstream of or within polyprenol biosynthetic process. Predicted to be located in endoplasmic reticulum. Predicted to be part of dehydrodolichyl diphosphate synthase complex. Human ortholog(s) of this gene implicated in developmental delay and seizures with or without movement abnormalities and retinitis pigmentosa 59. Orthologous to human DHDDS (dehydrodolichyl diphosphate synthase subunit). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See dhdds.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (61314253..61330554, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (58793264..58809726, complement)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase A1 L homeolog Neighboring gene high mobility group nucleosomal binding domain 2 L homeolog Neighboring gene lin-28 homolog A L homeolog Neighboring gene crystallin beta-gamma domain containing 2 L homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC130804

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables dehydrodolichyl diphosphate synthase activity IEA
Inferred from Electronic Annotation
more info
  
enables polyprenyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity, transferring alkyl or aryl (other than methyl) groups IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within polyprenol biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of dehydrodolichyl diphosphate synthase complex IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
dehydrodolichyl diphosphate synthase subunit L homeolog
NP_001082651.1
XP_018100383.1
XP_018100384.1
XP_041436845.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001089182.1 → NP_001082651.1  dehydrodolichyl diphosphate synthase subunit L homeolog

    See identical proteins and their annotated locations for NP_001082651.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072115
    UniProtKB/TrEMBL
    Q6IP04, Q7SYQ1
    Related
    ENSXLAP00005089978.1, ENSXLAT00005091654.1
    Conserved Domains (1) summary
    cd00475
    Location:28 → 248
    Cis_IPPS; Cis (Z)-Isoprenyl Diphosphate Synthases

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    61314253..61330554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018244895.2 → XP_018100384.1  dehydrodolichyl diphosphate synthase subunit L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0U3J2, Q7SYQ1

  2. XM_018244894.2 → XP_018100383.1  dehydrodolichyl diphosphate synthase subunit L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HEB6, A0A974DNH0, Q7SYQ1
    Related
    ENSXLAP00005090063.1, ENSXLAT00005091739.1
    Conserved Domains (1) summary
    cd00475
    Location:28 → 248
    Cis_IPPS; Cis (Z)-Isoprenyl Diphosphate Synthases

  3. XM_041580911.1 → XP_041436845.1  dehydrodolichyl diphosphate synthase subunit L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HEB6, A0A974DNH0, Q7SYQ1
    Conserved Domains (1) summary
    cd00475
    Location:28 → 248
    Cis_IPPS; Cis (Z)-Isoprenyl Diphosphate Synthases
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.