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Baldspot baldspot [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39860, updated on 2-Nov-2024

Summary

Official Symbol
Baldspotprovided by FlyBase
Official Full Name
baldspotprovided by FlyBase
Primary source
FLYBASE:FBgn0260960
Locus tag
Dmel_CG3971
See related
AllianceGenome:FB:FBgn0260960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
baldspot; blp; CG 3971; CG3971; Dmel\CG3971; Elovl6; ELOVL6; l(3)01895; l(3)02281; l(3)04106; l(3)neo21; l(3)neo22; NEST:bs18f10; NEST:bs18g10; noa
Summary
Enables fatty acid elongase activity. Involved in fatty acid elongation, saturated fatty acid. Located in mitochondrial outer membrane. Is expressed in several structures, including ganglia; gonad; gut section; imaginal disc; and presumptive embryonic/larval system. Orthologous to several human genes including ELOVL6 (ELOVL fatty acid elongase 6). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Baldspot in Genome Data Viewer
Location:
73B4-73B5; 3-44 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16648442..16661615, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16641542..16654715, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Mo25 Neighboring gene Abl tyrosine kinase Neighboring gene small nuclear RNA U12 Neighboring gene antisense RNA:CR46033 Neighboring gene G protein alpha subunit f Neighboring gene long non-coding RNA:CR45241

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables fatty acid elongase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables fatty acid elongase activity IEA
Inferred from Electronic Annotation
more info
 
enables fatty acid elongase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables fatty acid elongase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in fatty acid elongation, monounsaturated fatty acid IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in fatty acid elongation, polyunsaturated fatty acid IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in fatty acid elongation, saturated fatty acid IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in fatty acid elongation, saturated fatty acid IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in long-chain fatty acid biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in sphingolipid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in very long-chain fatty acid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum membrane ISM
Inferred from Sequence Model
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial outer membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
baldspot
Names
Baldspot-PA
Baldspot-PB
CG3971-PA
CG3971-PB
neighbor of abl
NP_648909.1
NP_730187.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    16648442..16661615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140652.4NP_648909.1  baldspot, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648909.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q95T92, Q9NB55, Q9VV87
    Related
    FBpp0075114
    Conserved Domains (1) summary
    pfam01151
    Location:30271
    ELO; GNS1/SUR4 family
  2. NM_168678.3NP_730187.2  baldspot, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730187.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q95T92, Q9NB55, Q9VV87
    Related
    FBpp0075115
    Conserved Domains (1) summary
    pfam01151
    Location:30271
    ELO; GNS1/SUR4 family