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arhgef39.L Rho guanine nucleotide exchange factor 39 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398581, updated on 18-Sep-2024

Summary

Official Symbol
arhgef39.L
Official Full Name
Rho guanine nucleotide exchange factor 39 L homeolog
Primary source
Xenbase:XB-GENE-6256029
Locus tag
XELAEV_18008644mg
See related
EnsemblRapid:ENSXLAG00005000051
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
xGef; arhgef39
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Genomic context

See arhgef39.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (233633509..233680098)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene provisional ortholog of myosin heavy chain 3 L homeolog Neighboring gene hypothetical protein LOC101731854 L homeolog Neighboring gene sphingomyelin phosphodiesterase 5-like L homeolog

Genomic regions, transcripts, and products

Genomic Sequence:
NC_054371.1 Chromosome 1L Reference Xenopus_laevis_v10.1 Primary Assembly

General gene information

Clone Names

  • MGC130986

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Rho guanine nucleotide exchange factor 39
Names
Rho family guanine-nucleotide exchange factor-like
putative Rho family guanine-nucleotide exchange factor
rp11-331f9.7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001089107.2NP_001082576.2  Rho guanine nucleotide exchange factor 39

    Status: VALIDATED

    Source sequence(s)
    JAGEVR010000054
    Related
    ENSXLAP00005000049.1, ENSXLAT00005000073.1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    233633509..233680098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)