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HBSAL_RS12070 IS4-like element ISH32 family transposase [ Halobacterium salinarum ]

Gene ID: 39856287, updated on 24-Oct-2024

Summary

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Gene symbol
HBSAL_RS12070
Gene description
IS4-like element ISH32 family transposase
Locus tag
HBSAL_RS12070
Gene type
protein coding
Organism
Halobacterium salinarum (strain: 91-R6, culture-collection: DSM:3754, type-material: type strain of Halobacterium salinarum)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
HBSAL_12625
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Genomic context

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Location:
plasmid: pHSAL1

NZ_CP038632.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene IS4 family transposase Neighboring gene AAA family ATPase Neighboring gene metallophosphoesterase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP038632.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole-genome comparison between the type strain of Halobacterium salinarum (DSM 3754(T) ) and the laboratory strains R1 and NRC-1. Pfeiffer F, et al. Microbiologyopen, 2020 Feb. PMID 31797576, Free PMC Article
  2. The Genome Sequence of the Halobacterium salinarum Type Strain Is Closely Related to That of Laboratory Strains NRC-1 and R1. Pfeiffer F, et al. Microbiol Resour Announc, 2019 Jul 11. PMID 31296677, Free PMC Article
  3. Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments. Siguier P, et al. Methods Mol Biol, 2012. PMID 22367867

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
IS4-like element ISH32 family transposase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP038632.1 Reference assembly

    Range
    110596..111930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012289608.1 MULTISPECIES: IS4-like element ISH32 family transposase [Halobacteriales]

    See identical proteins and their annotated locations for WP_012289608.1

    UniProtKB/TrEMBL
    A0A4D6GW63, A0A510NAU0, B0R9J9, L0JT90
    Conserved Domains (1) summary
    NF033592
    Location:17 → 360
    transpos_IS4_1; IS4 family transposase
Nucleotide Protein
Heading Accession and Version