prrc2c.S proline-rich coiled-coil 2C S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: prrc2c.S
Official Full Name: proline-rich coiled-coil 2C S homeolog
Primary source: Xenbase:XB-GENE-984677
Locus tag: XELAEV_18025442mg
See related: AllianceGenome:Xenbase:XB-GENE-984677
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: xtp2; bat2d1; bat2l2; prrc2c; bat2-iso
Summary: Predicted to act upstream of or within hematopoietic progenitor cell differentiation. Orthologous to human PRRC2C (proline rich coiled-coil 2C). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 4S

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4S	NC_054378.1 (86936207..86956258, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4S	NC_030731.1 (80606625..80626700, complement)

Chromosome 4S - NC_054378.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within hematopoietic progenitor cell differentiation	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: proline-rich coiled-coil 2C S homeolog

Names: HLA-B associated transcript 2-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001089057.1 → NP_001082526.1 proline-rich coiled-coil 2C S homeolog

See identical proteins and their annotated locations for NP_001082526.1

Status: PROVISIONAL

Source sequence(s)

BC072729

UniProtKB/TrEMBL

Q6GQL3, Q7ZYK1

Conserved Domains (1) summary

pfam07001
Location:1 → 161

BAT2_N; BAT2 N-terminus

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

86936207..86956258 complement

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GenBank, FASTA, Sequence Viewer (Graphics)