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appl1.S adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398493, updated on 18-Sep-2024

Summary

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Official Symbol
appl1.S
Official Full Name
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 S homeolog
Primary source
Xenbase:XB-GENE-17337320
Locus tag
XELAEV_18003046mg
See related
EnsemblRapid:ENSXLAG00005003183
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
appl; dip13alpha
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Genomic context

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See appl1.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
22
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (128473857..128503575, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694831.1 (1629500..1659964)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase E1 beta subunit S homeolog Neighboring gene potassium channel tetramerization domain containing 6 S homeolog Neighboring gene HESX homeobox 1 S homeolog Neighboring gene interleukin 17 receptor D S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase B binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within insulin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within signaling IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
  
located_in endosome IEA
Inferred from Electronic Annotation
more info
  
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
  
located_in ruffle IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DCC-interacting protein 13-alpha
Names
adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    128473857..128503575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018241190.2 → XP_018096679.1  DCC-interacting protein 13-alpha isoform X2

    UniProtKB/TrEMBL
    A0A8J0U508, Q4V834
    Related
    ENSXLAP00005009593.1, ENSXLAT00005009744.1

  2. XM_018241189.2 → XP_018096678.1  DCC-interacting protein 13-alpha isoform X1

    UniProtKB/TrEMBL
    A0A8J0U7T1, Q7ZWR1
    Related
    ENSXLAP00005009574.1, ENSXLAT00005009722.1
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials