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znf593.L zinc finger protein 593 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398463, updated on 4-Nov-2024

Summary

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Official Symbol
znf593.L
Official Full Name
zinc finger protein 593 L homeolog
Primary source
Xenbase:XB-GENE-1217401
Locus tag
XELAEV_18012131mg
See related
AllianceGenome:Xenbase:XB-GENE-1217401
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
znf593
Summary
Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in nucleus. Orthologous to human ZNF593 (zinc finger protein 593). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See znf593.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (62287744..62295931, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (59588165..59596367, complement)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene connector enhancer of kinase suppressor of Ras 1 L homeolog Neighboring gene uncharacterized LOC108708108 Neighboring gene transforming growth factor beta regulator 1 L homeolog Neighboring gene uncharacterized protein C1orf232-like Neighboring gene family with sequence similarity 110 member D L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC82828

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
zinc finger protein 593; zinc finger protein 593 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    62287744..62295931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018246453.2 → XP_018101942.1  zinc finger protein 593

    UniProtKB/TrEMBL
    A0A974HY39, Q6GNG4, Q7ZYS0

  2. XM_018246454.2 → XP_018101943.1  zinc finger protein 593

    UniProtKB/TrEMBL
    A0A974HY39, Q6GNG4, Q7ZYS0

  3. XM_018246455.2 → XP_018101944.1  zinc finger protein 593

    UniProtKB/TrEMBL
    A0A974HY39, Q6GNG4, Q7ZYS0
Nucleotide Protein Strain
Heading Accession and Version

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