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med15.L mediator complex subunit 15 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398388, updated on 17-Aug-2024

Summary

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Official Symbol
med15.L
Official Full Name
mediator complex subunit 15 L homeolog
Primary source
Xenbase:XB-GENE-1010511
Locus tag
XELAEV_18007606mg
See related
EnsemblRapid:ENSXLAG00005013351
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
med15; arc105; med15-a
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Genomic context

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See med15.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (165580823..165606208, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (152498044..152523688, complement)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene sphingomyelin phosphodiesterase 4 L homeolog Neighboring gene uncharacterized LOC108716031 Neighboring gene sirtuin 4 L homeolog Neighboring gene kelch like family member 22 L homeolog Neighboring gene v-crk avian sarcoma virus CT10 oncogene homolog-like L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A component of the ARC/Mediator complex required for TGF beta/Nodal signalling. Kato Y, et al. Nature, 2002 Aug 8. PMID 12167862
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 15
Names
activator-recruited cofactor 105 kDa component
xARC105

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001088823.1 → NP_001082292.1  mediator of RNA polymerase II transcription subunit 15

    See identical proteins and their annotated locations for NP_001082292.1

    Status: PROVISIONAL

    Source sequence(s)
    BC070536
    UniProtKB/Swiss-Prot
    Q6NS15, Q8JI77
    UniProtKB/TrEMBL
    A0A974E3D0
    Related
    ENSXLAP00005039438.1, ENSXLAT00005040359.1
    Conserved Domains (1) summary
    pfam09606
    Location:14 → 773
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    165580823..165606208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018237744.2 → XP_018093233.1  mediator of RNA polymerase II transcription subunit 15 isoform X3

    UniProtKB/TrEMBL
    A0A8J0TR04, A0A974E3D0
    Related
    ENSXLAP00005039444.1, ENSXLAT00005040365.1

  2. XM_018237789.2 → XP_018093278.1  mediator of RNA polymerase II transcription subunit 15 isoform X2

    UniProtKB/TrEMBL
    A0A8J0TZL0, A0A974E3D0

  3. XM_018237698.2 → XP_018093187.1  mediator of RNA polymerase II transcription subunit 15 isoform X1

    UniProtKB/TrEMBL
    A0A1L8I0E1, A0A974E3D0, A0A974I576
    Related
    ENSXLAP00005039418.1, ENSXLAT00005040339.1
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6NS15.1 GenPept UniProtKB/Swiss-Prot:Q6NS15

Gene LinkOut

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