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ewsr1.S EWS RNA binding protein 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398367, updated on 17-Aug-2024

Summary

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Official Symbol
ewsr1.S
Official Full Name
EWS RNA binding protein 1 S homeolog
Primary source
Xenbase:XB-GENE-17340666
Locus tag
XELAEV_18007424mg
See related
EnsemblRapid:ENSXLAG00005017787
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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Location:
chromosome: 1L
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (156924575..156950958, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (143956245..143982632, complement)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene RAS like family 10 member A L homeolog Neighboring gene growth arrest specific 2 like 1 L homeolog Neighboring gene rhomboid domain containing 3 L homeolog Neighboring gene EMI domain containing 1 L homeolog Neighboring gene deltex 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RNA-binding protein EWS

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    156924575..156950958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018260582.2 → XP_018116071.1  RNA-binding protein EWS isoform X2

    UniProtKB/TrEMBL
    A0A974E322, Q2VPG6
    Related
    ENSXLAP00005052524.1, ENSXLAT00005053696.1

  2. XM_018260574.2 → XP_018116063.1  RNA-binding protein EWS isoform X1

    UniProtKB/TrEMBL
    A0A8J0V6B1
    Related
    ENSXLAP00005052504.1, ENSXLAT00005053676.1

  3. XM_018260599.2 → XP_018116088.1  RNA-binding protein EWS isoform X3

    UniProtKB/TrEMBL
    A0A8J0V6C7
Nucleotide Protein Strain
Heading Accession and Version

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