cxcr1.S C-X-C motif chemokine receptor 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: cxcr1.S
Official Full Name: C-X-C motif chemokine receptor 1 S homeolog
Primary source: Xenbase:XB-GENE-5756232
Locus tag: XELAEV_18046978mg
See related: EnsemblRapid:ENSXLAG00005013604
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: cxcr1; cxcr2
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Genomic context

Location:: chromosome: 9_10S

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10S	NC_054388.1 (52242372..52249804, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10S	NC_030741.1 (45583626..45585526, complement)

Chromosome 9_10S - NC_054388.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables C-X-C chemokine receptor activity	IEA Inferred from Electronic Annotation more info
enables G protein-coupled receptor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within chemotaxis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: C-X-C motif chemokine receptor 1 S homeolog

Names: CXCR2 like protein; chemokine (C-X-C motif) receptor 1 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001088765.1 → NP_001082234.1 C-X-C motif chemokine receptor 1 S homeolog

See identical proteins and their annotated locations for NP_001082234.1

Status: PROVISIONAL

Source sequence(s)

BC084427

UniProtKB/TrEMBL

A0A974BUI1, Q8QFR5

Conserved Domains (1) summary

cd15178
Location:39 → 316

7tmA_CXCR1_2; CXC chemokine receptor types 1 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

52242372..52249804 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041577696.1 → XP_041433630.1 C-X-C motif chemokine receptor 1 S homeolog isoform X1

UniProtKB/TrEMBL

A0A974BUI1, Q8QFR5

Related

ENSXLAP00005040107.1, ENSXLAT00005041030.1

Conserved Domains (1) summary

cd15178
Location:39 → 316

7tmA_CXCR1_2; CXC chemokine receptor types 1 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors