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PEMT phosphatidylethanolamine N-methyltransferase [ Sus scrofa (pig) ]

Gene ID: 397654, updated on 5-Mar-2024

Summary

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Official Symbol
PEMTprovided by VGNC
Official Full Name
phosphatidylethanolamine N-methyltransferaseprovided by VGNC
Primary source
VGNC:VGNC:91311
See related
Ensembl:ENSSSCG00000018055
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in liver (RPKM 50.0), kidney (RPKM 28.0) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See PEMT in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (60880367..60919279)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (63139567..63158686, complement)

Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene sterol regulatory element binding transcription factor 1 Neighboring gene retinoic acid induced 1 Neighboring gene uncharacterized LOC110256138 Neighboring gene ras related dexamethasone induced 1 Neighboring gene mediator complex subunit 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylethanolamine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylethanolamine N-methyltransferase
Names
phosphatidylethanolamine N-methyltransferase-like protein
NP_999530.1
XP_020921908.1
XP_020921909.1
XP_020921910.1
XP_020921911.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214365.1 → NP_999530.1  phosphatidylethanolamine N-methyltransferase

    See identical proteins and their annotated locations for NP_999530.1

    Status: PROVISIONAL

    Source sequence(s)
    AY334573
    UniProtKB/TrEMBL
    A0A480VL80, A0A4X1SRV9, F1SB04, Q7YRH5
    Conserved Domains (1) summary
    pfam04191
    Location:92 → 191
    PEMT; Phospholipid methyltransferase

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

    Range
    60880367..60919279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021066250.1 → XP_020921909.1  phosphatidylethanolamine N-methyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A4X1SSU6, A0A8D1TLS8
    Conserved Domains (1) summary
    pfam04191
    Location:150 → 249
    PEMT; Phospholipid methyltransferase

  2. XM_021066249.1 → XP_020921908.1  phosphatidylethanolamine N-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A480VC23, A0A8D1D489, A0A8D1TLS8
    Related
    ENSSSCP00000061806.1, ENSSSCT00000078207.1
    Conserved Domains (1) summary
    pfam04191
    Location:152 → 251
    PEMT; Phospholipid methyltransferase

  3. XM_021066251.1 → XP_020921910.1  phosphatidylethanolamine N-methyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A480VL80, A0A4X1SRV9, F1SB04, Q7YRH5
    Related
    ENSSSCP00000019130.3, ENSSSCT00000019650.5
    Conserved Domains (1) summary
    pfam04191
    Location:92 → 191
    PEMT; Phospholipid methyltransferase

  4. XM_021066252.1 → XP_020921911.1  phosphatidylethanolamine N-methyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A480VL80, A0A4X1SRV9, F1SB04, Q7YRH5
    Conserved Domains (1) summary
    pfam04191
    Location:92 → 191
    PEMT; Phospholipid methyltransferase
Nucleotide Protein
Heading Accession and Version

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