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SUCLG2 succinate-CoA ligase GDP-forming subunit beta [ Sus scrofa (pig) ]

Gene ID: 397026, updated on 17-Aug-2024

Summary

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Official Symbol
SUCLG2provided by VGNC
Official Full Name
succinate-CoA ligase GDP-forming subunit betaprovided by VGNC
Primary source
VGNC:VGNC:93604
See related
Ensembl:ENSSSCG00000011501
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in liver (RPKM 114.5), kidney (RPKM 114.3) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See SUCLG2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 13 NC_010455.5 (48650851..49090521, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 13 NC_010455.4 (53872520..54030696, complement)

Chromosome 13 - NC_010455.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110256263 Neighboring gene kelch repeat and BTB domain containing 8 Neighboring gene uncharacterized LOC106505636 Neighboring gene TAFA chemokine like family member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. Cloning, characterization, and expression of the beta subunit of pig heart succinyl-CoA synthetase. Bailey DL, et al. Protein Sci, 1993 Aug. PMID 8401211, Free PMC Article
  2. Phosphorylated and dephosphorylated structures of pig heart, GTP-specific succinyl-CoA synthetase. Fraser ME, et al. J Mol Biol, 2000 Jun 23. PMID 10873456
  3. Evaluation and characterization of a porcine small intestine cDNA library: analysis of 839 clones. Wintero AK, et al. Mamm Genome, 1996 Jul. PMID 8672129
  4. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  5. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (GDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in succinyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial
Names
Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial
succinate-CoA ligase GDP-forming beta subunit
succinyl-CoA synthetase beta-subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010455.5 Reference Sscrofa11.1 Primary Assembly

    Range
    48650851..49090521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021070828.1 → XP_020926487.1  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A4X1VCQ3, A0A8D0MBK6
    Conserved Domains (1) summary
    cl25712
    Location:39 → 394
    SucC; Succinyl-CoA synthetase, beta subunit [Energy production and conversion]

  2. XM_003132309.6 → XP_003132357.4  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial isoform X1

    UniProtKB/Swiss-Prot
    P53590, Q95279
    UniProtKB/TrEMBL
    A0A287BA45, A0A480V4Z6, A0A4X1VEH3
    Related
    ENSSSCP00000053375.2, ENSSSCT00000042766.3
    Conserved Domains (1) summary
    PRK00696
    Location:39 → 432
    sucC; succinyl-CoA synthetase subunit beta; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53590.2 GenPept UniProtKB/Swiss-Prot:P53590

Gene LinkOut

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