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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_205276.4 → NP_990607.3 tenascin-R precursor
Status: VALIDATED
- Source sequence(s)
-
JAENSK010000237
- UniProtKB/Swiss-Prot
-
Q00546
- Conserved Domains (4) summary
-
- smart00060
Location:686 → 762
- FN3; Fibronectin type 3 domain
- smart00186
Location:1130 → 1338
- FBG; Fibrinogen-related domains (FReDs)
- cd00063
Location:327 → 412
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam18720
Location:203 → 230
- EGF_Tenascin; Tenascin EGF domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly
Genomic
-
NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly
- Range
-
7008602..7060534
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_015290244.4 → XP_015145730.1 tenascin-R isoform X1
- UniProtKB/Swiss-Prot
-
Q00546
- Related
- ENSGALP00010013686.1, ENSGALT00010023992.1
- Conserved Domains (6) summary
-
- smart00060
Location:1039 → 1108
- FN3; Fibronectin type 3 domain
- smart00186
Location:1132 → 1340
- FBG; Fibrinogen-related domains (FReDs)
- cd00063
Location:327 → 412
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:686 → 758
- fn3; Fibronectin type III domain
- pfam00757
Location:203 → 286
- Furin-like; Furin-like cysteine rich region
- pfam07974
Location:297 → 322
- EGF_2; EGF-like domain
-
XM_015290245.4 → XP_015145731.1 tenascin-R isoform X2
- UniProtKB/Swiss-Prot
-
Q00546
- UniProtKB/TrEMBL
-
A0A8V0XZF7
- Related
- ENSGALP00010013690.1, ENSGALT00010024004.1
- Conserved Domains (6) summary
-
- smart00060
Location:994 → 1063
- FN3; Fibronectin type 3 domain
- smart00186
Location:1087 → 1295
- FBG; Fibrinogen-related domains (FReDs)
- cd00063
Location:282 → 367
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:641 → 713
- fn3; Fibronectin type III domain
- pfam00757
Location:158 → 241
- Furin-like; Furin-like cysteine rich region
- pfam07974
Location:252 → 277
- EGF_2; EGF-like domain
Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w
Genomic
-
NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w
- Range
-
7019963..7072027
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_046922395.1 → XP_046778351.1 tenascin-R isoform X1
-
XM_046922396.1 → XP_046778352.1 tenascin-R isoform X2