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MPH1 3'-5' DNA helicase [ Verticillium nonalfalfae ]

Gene ID: 39603844, updated on 30-Dec-2023

Summary

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Gene symbol
MPH1
Gene description
3'-5' DNA helicase
Locus tag
D7B24_000155
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Verticillium nonalfalfae (strain: VnAa140/NRRL 66861, nat-host: Ailanthus altissima)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Verticillium
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Genomic context

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See MPH1 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_021167226.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene nuclear mRNA export, poly(A)+RNA binding protein Neighboring gene copper-binding transcription factor Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021167226.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome Sequence of a Lethal Vascular Wilt Fungus, Verticillium nonalfalfae, a Biological Control Used Against the Invasive Ailanthus altissima. Kasson MT, et al. Microbiol Resour Announc, 2019 Jan. PMID 30701257, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via synthesis-dependent strand annealing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork reversal IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3'-5' DNA helicase
XP_028499457.1
  • EggNog:ENOG410PH1A
    COG:L
    BUSCO:EOG093303D6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_021167226.1 Reference assembly

    Range
    513530..516979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028634417.1 → XP_028499457.1  3'-5' DNA helicase [Verticillium nonalfalfae]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3M9YLJ7
    Conserved Domains (1) summary
    COG1111
    Location:156 → 709
    MPH1; ERCC4-related helicase [Replication, recombination and repair]
Nucleotide Protein
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