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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001271901.2 → NP_001258830.2 zinc finger protein GLI2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
JAENSK010000236
- UniProtKB/TrEMBL
- A0A8V0Z2C5, A0A8V0Z9Q6
- Related
- ENSGALP00010027370.1, ENSGALT00010045939.1
- Conserved Domains (4) summary
-
- COG5048
Location:484 → 670
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:475 → 565
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:481 → 503
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam09606
Location:1089 → 1370
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
-
NM_001271902.2 → NP_001258831.2 zinc finger protein GLI2 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, and uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
JAENSK010000236
- UniProtKB/TrEMBL
- A0A8V0Z8S2, A0A8V0Z9Q6
- Related
- ENSGALP00010027364.1, ENSGALT00010045930.1
- Conserved Domains (4) summary
-
- COG5048
Location:455 → 641
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:446 → 536
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:452 → 474
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam09606
Location:1060 → 1341
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly
Genomic
-
NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly
- Range
-
25392370..25576378
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_025152142.2 → XP_025007910.2 zinc finger protein GLI2 isoform X2
- UniProtKB/TrEMBL
- A0A8V0Z2C5, A0A8V0Z9Q6
- Conserved Domains (4) summary
-
- COG5048
Location:484 → 670
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:475 → 565
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:481 → 503
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam09606
Location:1089 → 1370
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
-
XM_046943465.1 → XP_046799421.1 zinc finger protein GLI2 isoform X1
-
XM_040703353.2 → XP_040559287.1 zinc finger protein GLI2 isoform X3
- UniProtKB/TrEMBL
- A0A8V0Z8S2, A0A8V0Z9Q6
- Conserved Domains (4) summary
-
- COG5048
Location:455 → 641
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:446 → 536
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:452 → 474
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam09606
Location:1060 → 1341
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
-
XM_015289786.4 → XP_015145272.2 zinc finger protein GLI2 isoform X2
- UniProtKB/TrEMBL
- A0A8V0Z2C5, A0A8V0Z9Q6
- Conserved Domains (4) summary
-
- COG5048
Location:484 → 670
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:475 → 565
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:481 → 503
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam09606
Location:1089 → 1370
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
-
XM_040703355.2 → XP_040559289.1 zinc finger protein GLI2 isoform X5
- UniProtKB/TrEMBL
-
A0A8V0Z9Q6
- Conserved Domains (4) summary
-
- COG5048
Location:417 → 603
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:408 → 498
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:414 → 436
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam09606
Location:1022 → 1303
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
-
XM_040703354.2 → XP_040559288.1 zinc finger protein GLI2 isoform X4
- UniProtKB/TrEMBL
-
A0A8V0Z9Q6
- Conserved Domains (4) summary
-
- COG5048
Location:424 → 610
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:415 → 505
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:421 → 443
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam09606
Location:1029 → 1310
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
-
XM_046943467.1 → XP_046799423.1 zinc finger protein GLI2 isoform X6
-
XM_046943466.1 → XP_046799422.1 zinc finger protein GLI2 isoform X6
Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w
Genomic
-
NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w
- Range
-
25310507..25493664
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_046921096.1 → XP_046777052.1 zinc finger protein GLI2 isoform X2
- UniProtKB/TrEMBL
-
A0A8V0Z2C5
-
XM_046921097.1 → XP_046777053.1 zinc finger protein GLI2 isoform X3
- UniProtKB/TrEMBL
-
A0A8V0Z8S2
-
XM_046921095.1 → XP_046777051.1 zinc finger protein GLI2 isoform X2
- UniProtKB/TrEMBL
-
A0A8V0Z2C5
-
XM_046921099.1 → XP_046777055.1 zinc finger protein GLI2 isoform X5
-
XM_046921098.1 → XP_046777054.1 zinc finger protein GLI2 isoform X4
-
XM_046921101.1 → XP_046777057.1 zinc finger protein GLI2 isoform X6
-
XM_046921100.1 → XP_046777056.1 zinc finger protein GLI2 isoform X6
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001098851.1: Suppressed sequence
- Description
- NM_001098851.1: This RefSeq was permanently suppressed because currently there is insufficient support for the protein.