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TEAD3 TEA domain transcription factor 3 [ Gallus gallus (chicken) ]

Gene ID: 395810, updated on 10-Oct-2024

Summary

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Symbol
TEAD3provided by CGNC
Full Name
TEA domain transcription factor 3provided by CGNC
Primary source
CGNC:49491
See related
Ensembl:ENSGALG00010026874
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TEF-5; DTEF-1
Orthologs
human mouse all
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Genomic context

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See TEAD3 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (81630..102208, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (50683..71221, complement)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 1 Neighboring gene sphingomyelin phosphodiesterase 2 Neighboring gene tubby like protein 1 Neighboring gene FK506 binding protein 5 Neighboring gene colipase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DTEF-1, a novel member of the transcription enhancer factor-1 (TEF-1) multigene family. Azakie A, et al. J Biol Chem, 1996 Apr 5. PMID 8626520
  2. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
  3. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The non-AUG (AUA) translation initiation site, with the strong surrounding Kozak signal, is highly conserved in vertebrates.
    Title: DTEF-1, a novel member of the transcription enhancer factor-1 (TEF-1) multigene family.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hippo signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional enhancer factor TEF-5
Names
TEA domain family member 3
TEAD-3
cardiac-enriched TEA domain transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001396670.1 → NP_001383599.1  transcriptional enhancer factor TEF-5

    Status: VALIDATED

    Source sequence(s)
    BU230844, CD215400, HAEK01067949, JAENSK010000356, U46127, U46128
    UniProtKB/TrEMBL
    A0A8V1A1J2
    Related
    ENSGALP00010039726.1, ENSGALT00010065238.1
    Conserved Domains (3) summary
    smart00426
    Location:8 → 75
    TEA; TEA domain
    PHA03247
    Location:125 → 195
    PHA03247; large tegument protein UL36; Provisional
    pfam17725
    Location:199 → 408
    YBD; YAP binding domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    81630..102208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015298757.4 → XP_015154243.1  transcriptional enhancer factor TEF-5 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A1J2, A0A8V1A931
    Related
    ENSGALP00010039723.1, ENSGALT00010065225.1
    Conserved Domains (3) summary
    smart00426
    Location:8 → 75
    TEA; TEA domain
    PHA03247
    Location:125 → 195
    PHA03247; large tegument protein UL36; Provisional
    pfam17725
    Location:199 → 408
    YBD; YAP binding domain

  2. XM_040652808.2 → XP_040508742.1  transcriptional enhancer factor TEF-5 isoform X4

    UniProtKB/TrEMBL
    A0A8V1ABZ3
    Conserved Domains (2) summary
    smart00426
    Location:8 → 75
    TEA; TEA domain
    PRK14954
    Location:134 → 210
    PRK14954; DNA polymerase III subunits gamma and tau; Provisional

  3. XM_015298756.4 → XP_015154242.1  transcriptional enhancer factor TEF-5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1ABZ3, A0A8V1AE10
    Related
    ENSGALP00010039725.1, ENSGALT00010065232.1
    Conserved Domains (3) summary
    smart00426
    Location:8 → 75
    TEA; TEA domain
    PHA03247
    Location:146 → 216
    PHA03247; large tegument protein UL36; Provisional
    pfam17725
    Location:220 → 429
    YBD; YAP binding domain

  4. XM_015298759.4 → XP_015154245.3  transcriptional enhancer factor TEF-5 isoform X3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    50683..71221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691266.2 → XP_040547200.1  transcriptional enhancer factor TEF-5 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A1J2, A0A8V1A931
    Conserved Domains (3) summary
    smart00426
    Location:8 → 75
    TEA; TEA domain
    PHA03247
    Location:125 → 195
    PHA03247; large tegument protein UL36; Provisional
    pfam17725
    Location:199 → 408
    YBD; YAP binding domain

  2. XM_040691264.2 → XP_040547198.1  transcriptional enhancer factor TEF-5 isoform X4

    UniProtKB/TrEMBL
    A0A8V1ABZ3
    Conserved Domains (2) summary
    smart00426
    Location:8 → 75
    TEA; TEA domain
    PRK14954
    Location:134 → 210
    PRK14954; DNA polymerase III subunits gamma and tau; Provisional

  3. XM_040691265.2 → XP_040547199.1  transcriptional enhancer factor TEF-5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1ABZ3, A0A8V1AE10
    Conserved Domains (3) summary
    smart00426
    Location:8 → 75
    TEA; TEA domain
    PHA03247
    Location:146 → 216
    PHA03247; large tegument protein UL36; Provisional
    pfam17725
    Location:220 → 429
    YBD; YAP binding domain

  4. XM_040691263.2 → XP_040547197.2  transcriptional enhancer factor TEF-5 isoform X3

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q90701.2 GenPept UniProtKB/Swiss-Prot:Q90701

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