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CTAGE1 cutaneous T-cell lymphoma-associated antigen 1 [ Gallus gallus (chicken) ]

Gene ID: 395484, updated on 17-Aug-2024

Summary

Symbol
CTAGE1provided by CGNC
Full Name
cutaneous T-cell lymphoma-associated antigen 1provided by CGNC
Primary source
CGNC:6628
See related
Ensembl:ENSGALG00010019275
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
OTOR
Orthologs
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Genomic context

See CTAGE1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (5837018..5842319)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (5763044..5768343)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110411 Neighboring gene small nuclear ribonucleoprotein polypeptide B2 Neighboring gene uncharacterized LOC112532120 Neighboring gene uncharacterized LOC112532121 Neighboring gene uncharacterized LOC101747264

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_204732.2NP_990063.1  otoraplin precursor

    See identical proteins and their annotated locations for NP_990063.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000060
    UniProtKB/Swiss-Prot
    Q9I8P6
    Related
    ENSGALP00010027758.1, ENSGALT00010046607.1
    Conserved Domains (1) summary
    cd11891
    Location:34116
    MIAL; Melanoma Inhibitory Activity-Like protein

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5837018..5842319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5763044..5768343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)