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ITGB8 integrin subunit beta 8 [ Gallus gallus (chicken) ]

Gene ID: 395470, updated on 10-Oct-2024

Summary

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Official Symbol
ITGB8provided by CGNC
Official Full Name
integrin subunit beta 8provided by CGNC
Primary source
CGNC:49335
See related
Ensembl:ENSGALG00010003791
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ITGB8 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
17
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (29889593..29942529)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (29921290..29974194)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 196 Neighboring gene MACC1, MET transcriptional regulator Neighboring gene uncharacterized LOC121109727 Neighboring gene ATP binding cassette subfamily B member 5 Neighboring gene uncharacterized LOC776051 Neighboring gene Sp8 transcription factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Beta 8 integrins mediate interactions of chick sensory neurons with laminin-1, collagen IV, and fibronectin. Venstrom K, et al. Mol Biol Cell, 1995 Apr. PMID 7542940, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-8
Names
beta 8 integrin
integrin, beta 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    29889593..29942529
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046933080.1 → XP_046789036.1  integrin beta-8 isoform X1

  2. XM_040695440.2 → XP_040551374.1  integrin beta-8 isoform X4

    UniProtKB/TrEMBL
    A0A8V0XHD7
    Conserved Domains (1) summary
    cl00057
    Location:19 → 434
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  3. XM_003640686.6 → XP_003640734.4  integrin beta-8 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XAJ4, A0A8V0XLM2
    Related
    ENSGALP00010005138.1, ENSGALT00010008787.1
    Conserved Domains (1) summary
    cl00057
    Location:55 → 470
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  4. XM_015281861.4 → XP_015137347.2  integrin beta-8 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XAI4, A0A8V0XHD2
    Related
    ENSGALP00010005127.1, ENSGALT00010008772.1
    Conserved Domains (1) summary
    cl00057
    Location:55 → 470
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  5. XM_046933087.1 → XP_046789043.1  integrin beta-8 isoform X5

  6. XM_040695441.2 → XP_040551375.1  integrin beta-8 isoform X5

    UniProtKB/TrEMBL
    A0A8V0XLM2
    Conserved Domains (1) summary
    cl00057
    Location:1 → 396
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

RNA

  1. XR_001465128.4 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    29921290..29974194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046912086.1 → XP_046768042.1  integrin beta-8 isoform X1

  2. XM_040663960.2 → XP_040519894.1  integrin beta-8 isoform X4

    UniProtKB/TrEMBL
    A0A8V0XHD7
    Conserved Domains (1) summary
    cl00057
    Location:19 → 434
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  3. XM_040663957.2 → XP_040519891.1  integrin beta-8 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XAJ4, A0A8V0XLM2
    Conserved Domains (1) summary
    cl00057
    Location:55 → 470
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  4. XM_040663959.2 → XP_040519893.1  integrin beta-8 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XAI4, A0A8V0XHD2
    Conserved Domains (1) summary
    cl00057
    Location:55 → 470
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  5. XM_040663961.2 → XP_040519895.1  integrin beta-8 isoform X5

    UniProtKB/TrEMBL
    A0A8V0XLM2
    Conserved Domains (1) summary
    cl00057
    Location:1 → 396
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

RNA

  1. XR_005846521.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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