idh3a isocitrate dehydrogenase (NAD(+)) 3 alpha [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: idh3aprovided by Xenbase
Official Full Name: isocitrate dehydrogenase (NAD(+)) 3 alphaprovided by Xenbase
Primary source: Xenbase:XB-GENE-943186
See related: Ensembl:ENSXETG00000009754
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	3	NC_030679.2 (91067931..91090496, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	3	NC_030679.1 (81418685..81441230, complement)

Chromosome 3 - NC_030679.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables NAD binding	IEA Inferred from Electronic Annotation more info
enables magnesium ion binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within tricarboxylic acid cycle	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial

Names: isocitrate dehydrogenase 3 (NAD+) alpha

NP_989352.1

EC 1.1.1.41

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_204021.1 → NP_989352.1 isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial

See identical proteins and their annotated locations for NP_989352.1

Status: PROVISIONAL

Source sequence(s)

BC064220

UniProtKB/TrEMBL

F6SJ48, Q6P314

Related

ENSXETP00000021498.3, ENSXETT00000021498.4

Conserved Domains (1) summary

TIGR00175
Location:31 → 362

mito_nad_idh; isocitrate dehydrogenase, NAD-dependent, mitochondrial type