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slc25a20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 394703, updated on 4-Nov-2024

Summary

Official Symbol
slc25a20provided by Xenbase
Official Full Name
solute carrier family 25 (carnitine/acylcarnitine translocase), member 20provided by Xenbase
Primary source
Xenbase:XB-GENE-971451
See related
Ensembl:ENSXETG00000009331 AllianceGenome:Xenbase:XB-GENE-971451
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
cac; cact; dif-1; slc25a20.2
Summary
Predicted to be located in membrane. Human ortholog(s) of this gene implicated in carnitine-acylcarnitine translocase deficiency. Orthologous to human SLC25A20 (solute carrier family 25 member 20). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See slc25a20 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (136536963..136553169, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (126008243..126021555, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene inositol hexaphosphate kinase 2 Neighboring gene protein kinase, cAMP-dependent, regulatory subunit type II alpha Neighboring gene prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) Neighboring gene frizzled related protein 2 Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2

Genomic regions, transcripts, and products

General protein information

Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein
Names
carnitine/acylcarnitine translocase
solute carrier family 25 (carnitine/acylcarnitine translocase), member 20, gene 2
NP_989099.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_203768.1NP_989099.1  mitochondrial carnitine/acylcarnitine carrier protein

    See identical proteins and their annotated locations for NP_989099.1

    Status: PROVISIONAL

    Source sequence(s)
    BC062506
    UniProtKB/TrEMBL
    A0A6I8S2H4, F7CZJ9, Q6P628
    Related
    ENSXETP00000020560.3, ENSXETT00000020560.5
    Conserved Domains (1) summary
    pfam00153
    Location:108198
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    136536963..136553169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)