scfd2 sec1 family domain containing 2 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: scfd2provided by Xenbase
Official Full Name: sec1 family domain containing 2provided by Xenbase
Primary source: Xenbase:XB-GENE-5873004
See related: AllianceGenome:Xenbase:XB-GENE-5873004
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary: Predicted to act upstream of or within vesicle-mediated transport. Orthologous to human SCFD2 (sec1 family domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	1	NC_030677.2 (39636408..39637339, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	1	NC_030677.1 (30470037..30470968, complement)

Chromosome 1 - NC_030677.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within vesicle-mediated transport	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: sec1 family domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_203735.1 → NP_989066.1 sec1 family domain-containing protein 2

See identical proteins and their annotated locations for NP_989066.1

Status: PROVISIONAL

Source sequence(s)

BC061300

UniProtKB/TrEMBL

Q6P8C9

Conserved Domains (1) summary

PRK07577
Location:172 → 266

PRK07577; short chain dehydrogenase; Provisional