zp4.S zona pellucida glycoprotein 4 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: zp4.S
Official Full Name: zona pellucida glycoprotein 4 S homeolog
Primary source: Xenbase:XB-GENE-6254438
Locus tag: XELAEV_18020029mg
See related: EnsemblRapid:ENSXLAG00005019326
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ZPB; zp4; gp37; xlZPB; zp4-a; zp4-b; zp4.L; lzpb-a
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Genomic context

Location:: chromosome: 3S

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3S	NC_054376.1 (14931295..14937762)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3S	NC_030729.1 (14655307..14661783)

Chromosome 3S - NC_054376.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables acrosin binding	IEA Inferred from Electronic Annotation more info
enables structural constituent of egg coat	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within binding of sperm to zona pellucida	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within prevention of polyspermy	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within single fertilization	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in collagen-containing extracellular matrix	IEA Inferred from Electronic Annotation more info
located_in egg coat	IEA Inferred from Electronic Annotation more info
located_in extracellular region	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: zona pellucida glycoprotein 4 S homeolog

Names: vitelline envelope 37k glycoprotein xlZPB; zona pellucida glycoprotein 4 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001087599.1 → NP_001081068.1 zona pellucida glycoprotein 4 S homeolog precursor

See identical proteins and their annotated locations for NP_001081068.1

Status: PROVISIONAL

Source sequence(s)

BC124975

UniProtKB/TrEMBL

A0A974D8K9, Q91673

Related

ENSXLAP00005056898.1, ENSXLAT00005058208.1

Conserved Domains (3) summary

smart00018
Location:135 → 179

PD; P or trefoil or TFF domain

smart00241
Location:183 → 458

ZP; Zona pellucida (ZP) domain

pfam00100
Location:318 → 456

Zona_pellucida; Zona pellucida-like domain