fam91a1 family with sequence similarity 91 member A1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: fam91a1provided by ZNC
Official Full Name: family with sequence similarity 91 member A1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1187
See related: Ensembl:ENSDARG00000003320 AllianceGenome:ZFIN:ZDB-GENE-040426-1187
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:63609
Summary: Predicted to be involved in intracellular protein transport and vesicle tethering to Golgi. Predicted to be located in Golgi apparatus. Predicted to be active in cytoplasmic vesicle and trans-Golgi network. Orthologous to human FAM91A1 (family with sequence similarity 91 member A1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 19

Exon count:: 24

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (33093360..33137720)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (33506230..33550600)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in intracellular protein transport	IBA Inferred from Biological aspect of Ancestor more info
involved_in intracellular protein transport	ISS Inferred from Sequence or Structural Similarity more info
involved_in vesicle tethering to Golgi	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info
is_active_in cytoplasmic vesicle	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasmic vesicle	IEA Inferred from Electronic Annotation more info
located_in cytoplasmic vesicle	ISS Inferred from Sequence or Structural Similarity more info
is_active_in trans-Golgi network	IBA Inferred from Biological aspect of Ancestor more info
located_in trans-Golgi network	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: protein FAM91A1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200441.1 → NP_956735.1 protein FAM91A1

See identical proteins and their annotated locations for NP_956735.1

Status: PROVISIONAL

Source sequence(s)

BC054922

UniProtKB/Swiss-Prot

Q6TEP1, Q7SYC3

Related

ENSDARP00000008437.9, ENSDART00000019459.10

Conserved Domains (2) summary

pfam14647
Location:10 → 312

FAM91_N; FAM91 N-terminus

pfam14648
Location:371 → 811

FAM91_C; FAM91 C-terminus

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007130.7 Reference GRCz11 Primary Assembly

Range

33093360..33137720

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021468013.2 → XP_021323688.1 protein FAM91A1 isoform X1

UniProtKB/TrEMBL

A0A8M9PAU9

Conserved Domains (2) summary

pfam14647
Location:10 → 312

FAM91_N; FAM91 N-terminus

pfam14648
Location:371 → 804

FAM91_C; FAM91 C-terminus