dnajc17 DnaJ (Hsp40) homolog, subfamily C, member 17 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: dnajc17provided by ZNC
Official Full Name: DnaJ (Hsp40) homolog, subfamily C, member 17provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-894
See related: Ensembl:ENSDARG00000104959 AllianceGenome:ZFIN:ZDB-GENE-040426-894
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:56091
Summary: Predicted to enable RNA binding activity. Orthologous to human DNAJC17 (DnaJ heat shock protein family (Hsp40) member C17). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (1074539..1175056, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (839008..971005, complement)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in spliceosomal complex disassembly	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of spliceosomal complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: dnaJ homolog subfamily C member 17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200246.2 → NP_956540.2 dnaJ homolog subfamily C member 17

Status: VALIDATED

Source sequence(s)

CT583717

UniProtKB/TrEMBL

Q7ZUU4

Related

ENSDARP00000135201.2, ENSDART00000161202.2

Conserved Domains (2) summary

cd12429
Location:184 → 247

RRM_DNAJC17; RNA recognition motif in the DnaJ homolog subfamily C member 17

pfam00226
Location:11 → 73

DnaJ; DnaJ domain