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RPL18P4 ribosomal protein L18 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 392979, updated on 17-Sep-2024

Summary

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Official Symbol
RPL18P4provided by HGNC
Official Full Name
ribosomal protein L18 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:36144
See related
Ensembl:ENSG00000234985 AllianceGenome:HGNC:36144
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL18_1_838
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Genomic context

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See RPL18P4 in Genome Data Viewer
Location:
7q31.32
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (121440812..121441261, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (122756099..122756548, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (121080866..121081315, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26562 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:121025354-121025551 Neighboring gene FAM3 metabolism regulating signaling molecule C Neighboring gene hESC enhancers GRCh37_chr7:121035399-121035984 and GRCh37_chr7:121035985-121036569 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18576 Neighboring gene CYCS pseudogene 19 Neighboring gene Sharpr-MPRA regulatory region 7081 Neighboring gene uncharacterized LOC124901737 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:121121031-121121536 Neighboring gene uncharacterized LOC124901736 Neighboring gene uncharacterized LOC105375478 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:121145116-121146315 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:121150965-121152164 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:121184357-121185556 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:121208843-121209423 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:121209424-121210003 Neighboring gene RN7SK pseudogene 277

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Human chromosome 7: DNA sequence and biology. Scherer SW, et al. Science, 2003 May 2. PMID 12690205, Free PMC Article
  2. HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation. Yuan J, et al. Cell Mol Gastroenterol Hepatol, 2023. PMID 36244648, Free PMC Article
  3. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009449.2 

    Range
    101..550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    121440812..121441261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    122756099..122756548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001085391.1: Suppressed sequence

    Description
    NM_001085391.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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