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CROCCP1 CROCC pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 392547, updated on 17-Sep-2024

Summary

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Official Symbol
CROCCP1provided by HGNC
Official Full Name
CROCC pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:33602
See related
Ensembl:ENSG00000225769 AllianceGenome:HGNC:33602
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CROCCP
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Genomic context

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See CROCCP1 in Genome Data Viewer
Location:
Xq26.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (135432656..135439012)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (133758399..133764755)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (134566581..134572937)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21020 Neighboring gene small integral membrane protein 10 like 2A Neighboring gene RNA, 5S ribosomal pseudogene 515 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:134583585-134584086 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:134595644-134596166 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21021 Neighboring gene WDR4 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29981 Neighboring gene INTS6L antisense RNA 1 Neighboring gene integrator complex subunit 6 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • ciliary rootlet coiled-coil, rootletin pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009690.2 

    Range
    101..6457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    135432656..135439012
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    133758399..133764755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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