U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RPS27AP17 RPS27A pseudogene 17 [ Homo sapiens (human) ]

Gene ID: 392425, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
RPS27AP17provided by HGNC
Official Full Name
RPS27A pseudogene 17provided by HGNC
Primary source
HGNC:HGNC:36877
See related
AllianceGenome:HGNC:36877
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS27A_9_1763
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RPS27AP17 in Genome Data Viewer
Location:
Xp22.31
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (6989329..6990021)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (6543083..6543775)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (6907370..6908062)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene S232-VCX3A recombination region Neighboring gene uncharacterized LOC124905240 Neighboring gene variable charge X-linked 3A Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:6582190-6583002 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:6610973-6611531 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29381 Neighboring gene pseudouridine 5'-phosphatase Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:6849955-6850621 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:6850622-6851287 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:6876827-6877452 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:6877453-6878076 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:6884751-6885264 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:6894281-6894451 Neighboring gene uncharacterized LOC107987331 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:6975911-6976411 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29382 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:6986912-6987412 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:7000180-7000680 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:7000681-7001181 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29383 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29384 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29385 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29386 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29387 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:7033895-7034396 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:7034397-7034896 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20649 Neighboring gene microRNA 4767 Neighboring gene steroid sulfatase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Homology

Other Names

  • ribosomal protein S27a pseudogene 17

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011207.1 

    Range
    101..793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    6989329..6990021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    6543083..6543775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials