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BEND3P2 BEN domain containing 3 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 392368, updated on 17-Sep-2024

Summary

Official Symbol
BEND3P2provided by HGNC
Official Full Name
BEN domain containing 3 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:45015
See related
Ensembl:ENSG00000224809 AllianceGenome:HGNC:45015
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See BEND3P2 in Genome Data Viewer
Location:
9q22.31
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (92171231..92173494)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (104337738..104340001)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (94933513..94935776)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type H pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:94896185-94896816 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:94902296-94902875 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:94903455-94904034 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:94904035-94904613 Neighboring gene long intergenic non-protein coding RNA 475 Neighboring gene small nucleolar RNA U13 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:94909356-94910555 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20030 Neighboring gene serine protease 47, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28592 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:94951003-94951746 Neighboring gene uncharacterized LOC112268048

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011923.1 

    Range
    101..2364
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    92171231..92173494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791788.1 Reference GRCh38.p14 PATCHES

    Range
    5960..8223
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    104337738..104340001
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    GenBank, FASTA, Sequence Viewer (Graphics)