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BTF3P4 basic transcription factor 3 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 392350, updated on 17-Sep-2024

Summary

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Official Symbol
BTF3P4provided by HGNC
Official Full Name
basic transcription factor 3 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:38566
See related
AllianceGenome:HGNC:38566
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See BTF3P4 in Genome Data Viewer
Location:
9q21.13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (72107563..72108422, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (84258417..84259276, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (74722479..74723338, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:74622307-74622838 Neighboring gene Sharpr-MPRA regulatory region 3495 Neighboring gene heat shock protein family B (small) member 1 pseudogene 1 Neighboring gene uncharacterized LOC101927108 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:74663139-74664338 Neighboring gene chromosome 9 open reading frame 57 Neighboring gene Sharpr-MPRA regulatory region 10456 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:74761147-74762346 Neighboring gene guanine deaminase Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:74764055-74764556 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:74764557-74765056 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19946 Neighboring gene NME/NM23 nucleoside diphosphate kinase 2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005362.5 

    Range
    101..960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    72107563..72108422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    84258417..84259276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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