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ANKRD49P3 ANKRD49 pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 391834, updated on 17-Sep-2024

Summary

Official Symbol
ANKRD49P3provided by HGNC
Official Full Name
ANKRD49 pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:54621
See related
AllianceGenome:HGNC:54621
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See ANKRD49P3 in Genome Data Viewer
Location:
5q31.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (136857495..136858541)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (137380138..137381184)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (136193184..136194230)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901076 Neighboring gene MPRA-validated peak5484 silencer Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:135880336-135881535 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr5:135887367-135887882 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:135900628-135901278 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:135901279-135901929 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16380 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:136021270-136021774 Neighboring gene uncharacterized CTB-1I21.1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23181 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:136288693-136289609 Neighboring gene RNA, 5S ribosomal pseudogene 193 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:136372100-136372962 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:136385493-136386121 Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 Neighboring gene uncharacterized LOC105379192

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021899.2 

    Range
    68..1114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    136857495..136858541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    137380138..137381184
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)