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LOC391798 karyopherin subunit alpha 7 pseudogene [ Homo sapiens (human) ]

Gene ID: 391798, updated on 17-Sep-2024

Summary

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Gene symbol
LOC391798
Gene description
karyopherin subunit alpha 7 pseudogene
See related
Ensembl:ENSG00000251419
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC391798 in Genome Data Viewer
Location:
5q13.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (75831123..75832793, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (76312229..76313899, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (75126948..75128618, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC441087 Neighboring gene POC5 centriolar protein Neighboring gene solute carrier family 25 member 5 pseudogene 9 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22685 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22686 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22687 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:75212667-75212925 Neighboring gene aconitate hydratase, mitochondrial-like Neighboring gene synaptic vesicle glycoprotein 2C Neighboring gene bridging integrator 2 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021855.3 

    Range
    101..1771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    75831123..75832793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    76312229..76313899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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