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H3P18 H3 histone pseudogene 18 [ Homo sapiens (human) ]

Gene ID: 391744, updated on 17-Sep-2024

Summary

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Official Symbol
H3P18provided by HGNC
Official Full Name
H3 histone pseudogene 18provided by HGNC
Primary source
HGNC:HGNC:54452
See related
Ensembl:ENSG00000249620 AllianceGenome:HGNC:54452
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See H3P18 in Genome Data Viewer
Location:
5p15.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (17511832..17512238, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (17451273..17451679, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (17511941..17512347, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 11 like 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:17501918-17502418 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:17502419-17502919 Neighboring gene H3 histone pseudogene 17 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:17517917-17518420 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:17518421-17518925 Neighboring gene TATA-box binding protein associated factor 11 like 3 Neighboring gene OCT4-H3K27ac hESC enhancer GRCh37_chr5:17522147-17522814 Neighboring gene TATA-box binding protein associated factor 11 like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • H3 histone, family 3B (H3.3B) pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030068.1 

    Range
    101..507
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    17511832..17512238 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    17451273..17451679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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