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RPS15AP17 ribosomal protein S15a pseudogene 17 [ Homo sapiens (human) ]

Gene ID: 391656, updated on 17-Sep-2024

Summary

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Official Symbol
RPS15AP17provided by HGNC
Official Full Name
ribosomal protein S15a pseudogene 17provided by HGNC
Primary source
HGNC:HGNC:36888
See related
Ensembl:ENSG00000225405 AllianceGenome:HGNC:36888
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS15A_8_485
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Genomic context

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See RPS15AP17 in Genome Data Viewer
Location:
4q13.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (62105620..62106079, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (65542931..65543390, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (62971338..62971797, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900173 Neighboring gene ribosomal protein L17 pseudogene 19 Neighboring gene adhesion G protein-coupled receptor L3 Neighboring gene Sharpr-MPRA regulatory region 909 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:62252700-62253638 Neighboring gene Sharpr-MPRA regulatory region 11493 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:62459979-62460480 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62512092-62512706 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62512707-62513321 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:62629970-62630560 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:62630561-62631150 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62633919-62634780 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62635645-62636506 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62634781-62635644 Neighboring gene ribosomal protein S12 pseudogene 9 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:62776506-62777086 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:62777087-62777665 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:62857945-62858479 Neighboring gene ADGRL3 antisense RNA 1 Neighboring gene uncharacterized LOC101927145 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:63071027-63071527 Neighboring gene ribosomal protein L21 pseudogene 47

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011197.1 

    Range
    101..560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    62105620..62106079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    65542931..65543390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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